Package index

Data Preparation

Functions for preparing and cleaning occurrence data.

prepare_bean()

Prepare data for environmental thinning

Thinning Logic

Functions for addressing sampling bias by thinning in environmental space (E-space).

find_env_resolution()

Find objective environmental resolution using the Nearest Neighbor Elbow Method

thin_env_nd()

Thin occurrence data in n-dimensional environmental space

thin_env_center()

Deterministic centroid

plot_bean()

Visualize n-dimensional environmental thinning results

Modeling & Visualization

Functions for fundamental niche delineation and predicting suitability.

fit_ellipsoid()

Outlier removal

predict(<bean_ellipsoid>)

Predict suitability and Mahalanobis distance from a bean ellipsoid